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keras讀取h5文件load_weights、load的操作方法

發布時間:2020-06-23 11:08:22 來源:億速云 閱讀:4929 作者:清晨 欄目:開發技術

不懂keras讀取h5文件load_weights、load的操作方法?其實想解決這個問題也不難,下面讓小編帶著大家一起學習怎么去解決,希望大家閱讀完這篇文章后大所收獲。

關于保存h6模型、權重網上的示例非常多,也非常簡單。主要有以下兩個函數:

1、keras.models.load_model() 讀取網絡、權重

2、keras.models.load_weights() 僅讀取權重

load_model代碼包含load_weights的代碼,區別在于load_weights時需要先有網絡、并且load_weights需要將權重數據寫入到對應網絡層的tensor中。

下面以resnet50加載h6權重為例,示例代碼如下

import keras
from keras.preprocessing import image
import numpy as np

from network.resnet50 import ResNet50
#修改過,不加載權重(默認官方加載亦可)
model = ResNet50() 

# 參數默認 by_name = Fasle, 否則只讀取匹配的權重
# 這里h6的層和權重文件中層名是對應的(除input層)
model.load_weights(r'\models\resnet50_weights_tf_dim_ordering_tf_kernels_v2.h6') 

模型通過 model.summary()輸出

keras讀取h5文件load_weights、load的操作方法

一、模型加載權重 load_weights()

def load_weights(self, filepath, by_name=False, skip_mismatch=False, reshape=False):
 if h6py is None:
  raise ImportError('`load_weights` requires h6py.')
 with h6py.File(filepath, mode='r') as f:
  if 'layer_names' not in f.attrs and 'model_weights' in f:
   f = f['model_weights']
  if by_name:
   saving.load_weights_from_hdf5_group_by_name(
    f, self.layers, skip_mismatch=skip_mismatch,reshape=reshape)
  else:
   saving.load_weights_from_hdf5_group(f, self.layers, reshape=reshape)

這里關心函數saving.load_weights_from_hdf5_group(f, self.layers, reshape=reshape)即可,參數 f 傳遞了一個h6py文件對象。

讀取h6文件使用 h6py 包,簡單使用HDFView看一下resnet50的權重文件。

keras讀取h5文件load_weights、load的操作方法

resnet50_v2 這個權重文件,僅一個attr “layer_names”, 該attr包含177個string的Array,Array中每個元素就是層的名字(這里是嚴格對應在keras進行保存權重時網絡中每一層的name值,且層的順序也嚴格對應)。

對于每一個key(層名),都有一個屬性"weights_names",(value值可能為空)。

例如:

conv1的"weights_names"有"conv1_W:0"和"conv1_b:0",

flatten_1的"weights_names"為null。

keras讀取h5文件load_weights、load的操作方法

這里就簡單介紹,后面在代碼中說明h6py如何讀取權重數據。

二、從hdf5文件中加載權重 load_weights_from_hdf5_group()

1、找出keras模型層中具有weight的Tensor(tf.Variable)的層

def load_weights_from_hdf5_group(f, layers, reshape=False):
 # keras模型resnet50的model.layers的過濾
 # 僅保留layer.weights不為空的層,過濾掉無學習參數的層
 filtered_layers = []
 for layer in layers:
  weights = layer.weights
  if weights:
   filtered_layers.append(layer)

keras讀取h5文件load_weights、load的操作方法

filtered_layers為當前模型resnet50過濾(input、paddind、activation、merge/add、flastten等)層后剩下107層的list

2、從hdf5文件中獲取包含權重數據的層的名字

前面通過HDFView看過每一層有一個[“weight_names”]屬性,如果不為空,就說明該層存在權重數據。

先看一下控制臺對h6py對象f的基本操作(需要的去查看相關數據結構定義):

>>> f
<HDF5 file "resnet50_weights_tf_dim_ordering_tf_kernels_v2.h6" (mode r)>

>>> f.filename
'E:\\DeepLearning\\keras_test\\models\\resnet50_weights_tf_dim_ordering_tf_kernels_v2.h6'

>>> f.name  
'/'

>>> f.attrs.keys()   # f屬性列表 #
<KeysViewHDF5 ['layer_names']>

>>> f.keys() #無順序
<KeysViewHDF5 ['activation_1', 'activation_10', 'activation_11', 'activation_12', 
...,'activation_8', 'activation_9', 'avg_pool', 'bn2a_branch2', 'bn2a_branch3a', 
...,'res5c_branch3a', 'res5c_branch3b', 'res5c_branch3c', 'zeropadding2d_1']>

>>> f.attrs['layer_names']  #*** 有順序, 和summary()對應 ****
array([b'input_1', b'zeropadding2d_1', b'conv1', b'bn_conv1',
  b'activation_1', b'maxpooling2d_1', b'res2a_branch3a',
  ..., b'res2a_branch2', b'bn2a_branch3c', b'bn2a_branch2', 
  b'merge_1', b'activation_47', b'res5c_branch3b', b'bn5c_branch3b',
  ..., b'activation_48', b'res5c_branch3c', b'bn5c_branch3c', 
  b'merge_16', b'activation_49', b'avg_pool', b'flatten_1', b'fc1000'],
  dtype='|S15')

>>> f['input_1']
<HDF5 group "/input_1" (0 members)>

>>> f['input_1'].attrs.keys() # 在keras中,每一個層都有‘weight_names'屬性 #
<KeysViewHDF5 ['weight_names']>

>>> f['input_1'].attrs['weight_names'] # input層無權重 #
array([], dtype=float64)

>>> f['conv1']
<HDF5 group "/conv1" (2 members)>

>>> f['conv1'].attrs.keys()
<KeysViewHDF5 ['weight_names']>

>>> f['conv1'].attrs['weight_names'] # conv層有權重w、b #
array([b'conv1_W:0', b'conv1_b:0'], dtype='|S9')

從文件中讀取具有權重數據的層的名字列表

 # 獲取后hdf5文本文件中層的名字,順序對應
 layer_names = load_attributes_from_hdf5_group(f, 'layer_names')
 #上一句實現 layer_names = [n.decode('utf8') for n in f.attrs['layer_names']]
 filtered_layer_names = []
 for name in layer_names:
  g = f[name]
  weight_names = load_attributes_from_hdf5_group(g, 'weight_names')
  #上一句實現 weight_names = [n.decode('utf8') for n in f[name].attrs['weight_names']]
  #保留有權重層的名字
  if weight_names:
   filtered_layer_names.append(name)
 layer_names = filtered_layer_names
 # 驗證模型中有有權重tensor的層 與 從h6中讀取有權重層名字的 數量 保持一致。
 if len(layer_names) != len(filtered_layers):
  raise ValueError('You are trying to load a weight file '
       'containing ' + str(len(layer_names)) +
       ' layers into a model with ' +
       str(len(filtered_layers)) + ' layers.')

3、從hdf5文件中讀取的權重數據、和keras模型層tf.Variable打包對應

先看一下權重數據、層的權重變量(Tensor tf.Variable)對象,以conv1為例

>>> f['conv1']['conv1_W:0'] # conv1_W:0 權重數據數據集
<HDF5 dataset "conv1_W:0": shape (7, 7, 3, 64), type "<f4">

>>> f['conv1']['conv1_W:0'].value # conv1_W:0 權重數據的值, 是一個標準的4d array
array([[[[ 2.82526277e-02, -1.18737184e-02, 1.51488732e-03, ...,
   -1.07003953e-02, -5.27982824e-02, -1.36667420e-03],
   [ 5.86827798e-03, 5.04415408e-02, 3.46324709e-03, ...,
   1.01423981e-02, 1.39493728e-02, 1.67549420e-02],
   [-2.44090753e-03, -4.86173332e-02, 2.69966386e-03, ...,
   -3.44439060e-04, 3.48098315e-02, 6.28910400e-03]],
  [[ 1.81872323e-02, -7.20698107e-03, 4.80302610e-03, ...,
 …. ]]]])

>>> conv1_w = np.asarray(f['conv1']['conv1_W:0']) # 直接轉換成numpy格式 
>>> conv1_w.shape
(7, 7, 3, 64)

# 卷積層
>>> filtered_layers[0]
<keras.layers.convolutional.Conv2D object at 0x000001F7487C0E10>

>>> filtered_layers[0].name
'conv1'

>>> filtered_layers[0].input
<tf.Tensor 'conv1_pad/Pad:0' shape=(&#63;, 230, 230, 3) dtype=float32>

#卷積層權重數據
>>> filtered_layers[0].weights
[<tf.Variable 'conv1/kernel:0' shape=(7, 7, 3, 64) dtype=float32_ref>, 
 <tf.Variable 'conv1/bias:0' shape=(64,) dtype=float32_ref>]

將模型權重數據變量Tensor(tf.Variable)、讀取的權重數據打包對應,便于后續將數據寫入到權重變量中.

weight_value_tuples = []
# 枚舉過濾后的層
for k, name in enumerate(layer_names):
 g = f[name]
 weight_names = load_attributes_from_hdf5_group(g, 'weight_names')
 # 獲取文件中當前層的權重數據list, 數據類型轉換為numpy array 
 weight_values = [np.asarray(g[weight_name]) for weight_name in weight_names]
 # 獲取keras模型中層具有的權重數據tf.Variable個數
 layer = filtered_layers[k]
 symbolic_weights = layer.weights
 # 權重數據預處理
 weight_values = preprocess_weights_for_loading(layer, weight_values,
       original_keras_version, original_backend,reshape=reshape)
 # 驗證權重數據、tf.Variable數據是否相同
 if len(weight_values) != len(symbolic_weights):
  raise ValueError('Layer #' + str(k) + '(named "' + layer.name + 
    '" in the current model) was found to correspond to layer ' + name + 
    ' in the save file. However the new layer ' + layer.name + ' expects ' + 
    str(len(symbolic_weights)) + 'weights, but the saved weights have ' + 
    str(len(weight_values)) + ' elements.')
 # tf.Variable 和 權重數據 打包
 weight_value_tuples += zip(symbolic_weights, weight_values)

4、將讀取的權重數據寫入到層的權重變量中

在3中已經對應好每一層的權重變量Tensor和權重數據,后面將使用tensorflow的sess.run方法進新寫入,后面一行代碼。

K.batch_set_value(weight_value_tuples)

實際實現

def batch_set_value(tuples):
 if tuples:
  assign_ops = []
  feed_dict = {}
  for x, value in tuples: 
   # 獲取權重數據類型  
   value = np.asarray(value, dtype=dtype(x))
   tf_dtype = tf.as_dtype(x.dtype.name.split('_')[0])
   if hasattr(x, '_assign_placeholder'):
    assign_placeholder = x._assign_placeholder
    assign_op = x._assign_op
   else:
    # 權重的tf.placeholder
    assign_placeholder = tf.placeholder(tf_dtype, shape=value.shape)
    # 對權重變量Tensor的賦值 assign的operation
    assign_op = x.assign(assign_placeholder)
    x._assign_placeholder = assign_placeholder # 用處&#63;
    x._assign_op = assign_op     # 用處&#63;
   assign_ops.append(assign_op)
   feed_dict[assign_placeholder] = value
  # 利用tensorflow的tf.Session().run()對tensor進行assign批次賦值
  get_session().run(assign_ops, feed_dict=feed_dict)

至此,先有網絡模型,后從h6中加載權重文件結束。后面就可以直接利用模型進行predict了。

三、模型加載 load_model()

這里基本和前面類似,多了一個加載網絡而已,后面的權重加載方式一樣。

首先將前面加載權重的模型使用 model.save()保存為res50_model.h6,使用HDFView查看

keras讀取h5文件load_weights、load的操作方法

屬性成了3個,backend, keras_version和model_config,用于說明模型文件由某種后端生成,后端版本,以及json格式的網絡模型結構。

有一個key鍵"model_weights", 相較于屬性有前面的h6模型,屬性多了2個為['backend', 'keras_version', 'layer_names'] 該key鍵下面的鍵值是一個list, 和前面的h6模型的權重數據完全一致。

類似的,先利用python代碼查看下文件結構

>>> ff
<HDF5 file "res50_model.h6" (mode r)>

>>> ff.attrs.keys()
<KeysViewHDF5 ['backend', 'keras_version', 'model_config']>

>>> ff.keys()
<KeysViewHDF5 ['model_weights']>

>>> ff['model_weights'].attrs.keys() ## ff['model_weights']有三個屬性
<KeysViewHDF5 ['backend', 'keras_version', 'layer_names']>

>>> ff['model_weights'].keys() ## 無順序
<KeysViewHDF5 ['activation_1', 'activation_10', 'activation_11', 'activation_12', 
 …, 'avg_pool', 'bn2a_branch2', 'bn2a_branch3a', 'bn2a_branch3b', 
 …, 'bn5c_branch3c', 'bn_conv1', 'conv1', 'conv1_pad', 'fc1000', 'input_1', 
 …, 'c_branch3a', 'res5c_branch3b', 'res5c_branch3c']>

>>> ff['model_weights'].attrs['layer_names'] ## 有順序
array([b'input_1', b'conv1_pad', b'conv1', b'bn_conv1', b'activation_1',
  b'pool1_pad', b'max_pooling2d_1', b'res2a_branch3a',
  b'bn2a_branch3a', b'activation_2', b'res2a_branch3b',
 ... 省略
  b'activation_48', b'res5c_branch3c', b'bn5c_branch3c', b'add_16',
  b'activation_49', b'avg_pool', b'fc1000'], dtype='|S15')

1、加載模型主函數load_model

def load_model(filepath, custom_objects=None, compile=True):
 if h6py is None:
  raise ImportError('`load_model` requires h6py.')
 model = None
 opened_new_file = not isinstance(filepath, h6py.Group)
 # h6加載后轉換為一個 h6dict 類,編譯通過鍵取值
 f = h6dict(filepath, 'r')
 try:
  # 序列化并compile
  model = _deserialize_model(f, custom_objects, compile)
 finally:
  if opened_new_file:
   f.close()
 return model

2、序列化并編譯_deserialize_model

函數def _deserialize_model(f, custom_objects=None, compile=True)的代碼顯示主要部分

第一步,加載網絡結構,實現完全同keras.models.model_from_json()

# 從h6中讀取網絡結構的json描述字符串
model_config = f['model_config']
model_config = json.loads(model_config.decode('utf-8'))
# 根據json構建網絡模型結構
model = model_from_config(model_config, custom_objects=custom_objects)

第二步,加載網絡權重,完全同model.load_weights()

# 獲取有順序的網絡層名, 網絡層
model_weights_group = f['model_weights']
layer_names = model_weights_group['layer_names'] 
layers = model.layers
# 過濾 有權重Tensor的層
for layer in layers:
 weights = layer.weights
 if weights:
  filtered_layers.append(layer)
# 過濾有權重的數據
filtered_layer_names = []
for name in layer_names:
 layer_weights = model_weights_group[name]
 weight_names = layer_weights['weight_names']
 if weight_names:
  filtered_layer_names.append(name)
# 打包數據 weight_value_tuples
weight_value_tuples = []
for k, name in enumerate(layer_names):
 layer_weights = model_weights_group[name]
 weight_names = layer_weights['weight_names']
 weight_values = [layer_weights[weight_name] for weight_name in weight_names]
 layer = filtered_layers[k]
 symbolic_weights = layer.weights
 weight_values = preprocess_weights_for_loading(...)
 weight_value_tuples += zip(symbolic_weights, weight_values) 
# 批寫入 
K.batch_set_value(weight_value_tuples)

第三步,compile并返回模型

正常情況,模型網路建立、加載權重后 compile之后就完成。若還有其他設置,則可以再進行額外的處理。(模型訓練后save會有額外是參數設置)。

例如,一個只有dense層的網路訓練保存后查看,屬性多了"training_config",鍵多了"optimizer_weights",如下圖。

keras讀取h5文件load_weights、load的操作方法

當前res50_model.h6沒有額外的參數設置。

處理代碼如下

if compile:
 training_config = f.get('training_config')
 if training_config is None:
 warnings.warn('No training configuration found in save file: '
     'the model was *not* compiled. Compile it manually.')
  return model
 training_config = json.loads(training_config.decode('utf-8'))
 optimizer_config = training_config['optimizer_config']
 optimizer = optimizers.deserialize(optimizer_config, custom_objects=custom_objects)
 # Recover loss functions and metrics.
 loss = convert_custom_objects(training_config['loss'])
 metrics = convert_custom_objects(training_config['metrics'])
 sample_weight_mode = training_config['sample_weight_mode']
 loss_weights = training_config['loss_weights']
 # Compile model.
 model.compile(optimizer=optimizer, loss=loss, metrics=metrics,
   loss_weights=loss_weights, sample_weight_mode=sample_weight_mode)
 # Set optimizer weights.
 if 'optimizer_weights' in f:
  # Build train function (to get weight updates).
  model._make_train_function()
  optimizer_weights_group = f['optimizer_weights']
  optimizer_weight_names = [ 
   n.decode('utf8') for n in ptimizer_weights_group['weight_names']]
  optimizer_weight_values = [
   optimizer_weights_group[n] for n in optimizer_weight_names]
  try:
   model.optimizer.set_weights(optimizer_weight_values)
  except ValueError:
   warnings.warn('Error in loading the saved optimizer state. As a result,'
    'your model is starting with a freshly initialized optimizer.')

更多相關知識內容:

Tensorflow2.0 tf.keras.Model.load_weights() 報錯的處理方法

調用Kears中kears.model.load_model方法會遇到哪些問題

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